PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004515485.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ARR-B
Protein Properties Length: 410aa    MW: 46800.5 Da    PI: 8.5644
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004515485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.81.1e-27209262155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+r+ Wt eLH++Fv+av+qL G +kA Pk+i+++m+v+gLt++h++SHLQk+Rl
  XP_004515485.1 209 KARVAWTVELHQQFVRAVKQL-GVDKAGPKRIMKIMNVNGLTRAHIASHLQKFRL 262
                     68*******************.********************************8 PP
2Response_reg49.42.5e-17181261109
                     EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS
    Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 
                     vl+vd + ++++ +++++ k +y  v+++ + ++a+++l+e++  +D+ill + m +m+ ++++ + +++  k+p+i++++ g+ + + +a++ G
  XP_004515485.1  18 VLVVDHDIDLLNDVQNMCLKLDY-CVTTCLTISDAWNILRERKgfFDVILLNVLMQDMNSYDFILHVTQQI-KIPVIMMSSDGTTSSVMRAIENG 110
                     89*********************.*****************999***********************9988.9********************** PP

                     ESEEEESS--HHHHHH CS
    Response_reg  94 akdflsKpfdpeelvk 109
                     a d+  Kp +++++ +
  XP_004515485.1 111 ACDYWIKPLHEKQIKN 126
                     ***********99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23003.3E-2615147No hitNo description
SuperFamilySSF521722.42E-2515140IPR011006CheY-like superfamily
SMARTSM004484.5E-1516128IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011029.89217132IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.4E-1318126IPR001789Signal transduction response regulator, receiver domain
CDDcd001566.94E-1619132No hitNo description
PROSITE profilePS5129413.081206265IPR017930Myb domain
SuperFamilySSF466895.73E-19207266IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.6E-29207266IPR009057Homeodomain-like
TIGRFAMsTIGR015573.5E-22209262IPR006447Myb domain, plants
PfamPF002496.9E-8211260IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MVFSIEKEAL QISTNIKVLV VDHDIDLLND VQNMCLKLDY CVTTCLTISD AWNILRERKG  60
FFDVILLNVL MQDMNSYDFI LHVTQQIKIP VIMMSSDGTT SSVMRAIENG ACDYWIKPLH  120
EKQIKNMWIH AARKLMNENK KQEINRKNLE FEGKKIKGEK DDLILGLIDA TSEGVKIDPK  180
EGCSKVIVEK SDYVIEKDNL NENEPSTKKA RVAWTVELHQ QFVRAVKQLG VDKAGPKRIM  240
KIMNVNGLTR AHIASHLQKF RLYLKREETH KHLQQKKQQQ QNGTVKAIDS NNSNGSEGFD  300
NHALALTNHV LNPLIEVPKH DHHQNQNSSN AQLKTSTMWP NFKHESYGCN SSNQHVSSNT  360
LLQHEYAPSS SSYGKWVPTE SSNHLVDPAN IRNLILMKNV TNTKPMQQET
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-16206266262ARR10-B
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004515485.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012567278.10.0two-component response regulator ARR14-like isoform X1
TrEMBLA0A1S3DVM70.0A0A1S3DVM7_CICAR; two-component response regulator ARR14-like isoform X1
STRINGXP_004515485.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1563334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.14e-58response regulator 14