PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004515611.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 90aa    MW: 10633 Da    PI: 7.5455
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004515611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH192.5e-0615571455
                    HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    ++iN+  ++L+ llP+ + + ++   s + iL+++ ++I+ Lq
  XP_004515611.1 15 KQINELVSRLQLLLPQlNNQRNNSMQSASKILQETLNHIRRLQ 57
                    58**************54455555599***************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.94E-71573IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-71661IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MSGQRSSRDS KFSEKQINEL VSRLQLLLPQ LNNQRNNSMQ SASKILQETL NHIRRLQKEV  60
EEISEKLTQL MDSVDINDID RRTLENFLQY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004515611.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004515611.13e-57transcription factor PRE6-like
TrEMBLA0A1S2Z5U06e-56A0A1S2Z5U0_CICAR; transcription factor PRE6-like
STRINGXP_004515611.11e-56(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106242439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.13e-12bHLH family protein