PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004515941.1
Organism
Cicer arietinum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family ERF
Protein Properties Length: 233aa    MW: 26573.9 Da    PI: 9.6713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004515941.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.11.9e-1798148256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+A  a+++ + k++ge
  XP_004515941.1  98 LYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFDTAEDAGMAYDREAFKFRGE 148
                     59******9.**********954...5*************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.41E-3397157No hitNo description
SMARTSM003806.0E-3798161IPR001471AP2/ERF domain
PROSITE profilePS5103222.40598155IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-3098156IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-2198156IPR016177DNA-binding domain
PRINTSPR003671.3E-1099110IPR001471AP2/ERF domain
PfamPF008474.3E-1199148IPR001471AP2/ERF domain
PRINTSPR003671.3E-10121137IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MPYTYRPLKK ICSPQNQNTN QPPSSKIIFP FAFEGSSQHP ISFQHQSTTT TTTNLLPFSP  60
PLHPTTQHII PFDHKQNTFS DPNKLLRSKT QPSNATKLYR GVRQRHWGKW VAEIRLPRKR  120
TRLWLGTFDT AEDAGMAYDR EAFKFRGENP KLNFPELFLN KDKPTSSSSS TIVQISSASL  180
PHEGSSSISC QNTNQPKLVS EEHSMQILNV SETGESISKP KELVLEEMED WFN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-2197155160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-2197155463ATERF1
3gcc_A3e-2197155463ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_004515941.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004515941.21e-173ethylene-responsive transcription factor ERF056-like
TrEMBLA0A1S2Z6I21e-172A0A1S2Z6I2_CICAR; ethylene-responsive transcription factor ERF056-like
STRINGXP_004515941.11e-173(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42683258
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.19e-41ERF family protein