PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008220396.2
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 153aa    MW: 17880.2 Da    PI: 10.5664
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008220396.2genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.35.8e-1266116555
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                     k+ rrk +NRe+ArrsR RKk  +e L++ v  L+ eN++Lk++      +
  XP_008220396.2  66 KKLRRKKSNRESARRSRWRKKRHLEDLTNDVNRLKVENRELKNRFGLVARK 116
                     899***************************************987766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-1162126IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.3E-1063113No hitNo description
PROSITE profilePS5021710.82964116IPR004827Basic-leucine zipper domain
PfamPF001702.0E-966114IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-1066115No hitNo description
CDDcd147022.03E-1467118No hitNo description
PROSITE patternPS0003606984IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MIMSSSAMLF NHEPIHFNRF ECPVQETGLT TADIQELLSL LQEGNSASPN SGSEDSNRAV  60
YSVDEKKLRR KKSNRESARR SRWRKKRHLE DLTNDVNRLK VENRELKNRF GLVARKCHVT  120
WRENDRLTSE SLALRARLSD LYRNFVGMQM LSQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16986RKKSNRESARRSRWRKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008220396.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008220396.21e-110PREDICTED: basic leucine zipper 8
TrEMBLM5XJA92e-93M5XJA9_PRUPE; Uncharacterized protein
STRINGXP_008220396.11e-104(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59530.18e-23basic leucine-zipper 4