PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221120.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 330aa    MW: 37544.9 Da    PI: 4.8191
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221120.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.11.2e-21101413128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevd.iykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkd 89 
                     +GfrFhPtd+el++++L kk+ +k+    + ++++++++ + ++ePw         +  ++++yfFs+ ++ +++g+r +r + + g+W++  ++
  XP_008221120.1  10 VGFRFHPTDQELISYFLYKKAVAKEplmASYSNIVHDFNlLGETEPWVVWDifgGPDLIDEDLYFFSELKNLSPKGSRIKRkIEAGGTWSEAFSK 104
                     7*******************888886765556679999725689***9964233223356799******************5555899**99886 PP

             NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     k   +++g+ +g k+ L + +  +   ++ +W+++ey+l
  XP_008221120.1 105 KVYDETTGNPIGRKRNLRYEN--EGCEHHGKWLLEEYSL 141
                     5555559999********983..4444589*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.14E-218156IPR003441NAC domain
PROSITE profilePS5100527.238157IPR003441NAC domain
PfamPF023653.8E-1610141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MTNYSGNRLV GFRFHPTDQE LISYFLYKKA VAKEPLMASY SNIVHDFNLL GETEPWVVWD  60
IFGGPDLIDE DLYFFSELKN LSPKGSRIKR KIEAGGTWSE AFSKKVYDET TGNPIGRKRN  120
LRYENEGCEH HGKWLLEEYS LVDQETQKIV LCRLKKNNRV WNKINNSSQE LKEKPSNKKA  180
RKGLGSPRTK IEDEEPHRTS GPSSVYNNLD QDLIIDTNYN AISNNICGDN QDNMLMTSDF  240
ASDPVCFDYG GLTDEEYVFD VNELLATVEP QPLSLELPQM AETLEPLLSS GLGDDRAVEA  300
WNSSGLENIY ATNKKTSHIG STVKKYFENL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008221120.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221120.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A314XQ770.0A0A314XQ77_PRUYE; NAC domain-containing protein 41-like
STRINGXP_008221120.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-14NAC domain containing protein 83