PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221348.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TALE
Protein Properties Length: 465aa    MW: 51746 Da    PI: 6.1705
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221348.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.72.3e-093884251954
                     HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     Fe   ++yp+ +e+  LA+++gL+++qV++WF N R +
  XP_008221348.1 388 FEHflHPYPNDSEKLLLASQTGLSKNQVSNWFINARVR 425
                     564459******************************88 PP
2BELL99.23.2e-32251321272
            BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                     ++elq++ a L++lle+V++r ++y++q++ v+ssFe+v+g g+ak+Yt+lAlka+SrhF +L+dai+++i
  XP_008221348.1 251 KHELQARLANLITLLEQVEDRCEKYYHQMEEVMSSFEMVVGEGAAKSYTALALKAMSRHFCSLRDAIVSHI 321
                     79******************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.3E-34181319IPR006563POX domain
PfamPF075266.8E-41186318IPR006563POX domain
PROSITE profilePS5007111.807366429IPR001356Homeobox domain
SMARTSM003894.1E-8369433IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.5E-26374435IPR009057Homeodomain-like
CDDcd000862.93E-11375430No hitNo description
SuperFamilySSF466894.71E-17375436IPR009057Homeodomain-like
PfamPF059201.8E-16386425IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MVSQDSPPNP ASSIFHQFII SDSIAAQNHL ESQHLDAYES SFPNSNTFPQ SLGVLPSLHS  60
LGERMSRSVH LVQARTGAED SDMNNHTRHL MDLPRAAIEN QAQRLSLSLG SHMLVPSVQY  120
RQRSMNSDLM SHNHFIIGEE SGEACNPGVE HVSDEYCFTG SALASSSNSL SRSCSTSYGT  180
ESLADVIGNS RYLKPAQSLL DEIVNVGGKQ VDISNEKHAG KLYGEGRRGA MGLSSELKAE  240
LCCNGLMSAD KHELQARLAN LITLLEQVED RCEKYYHQME EVMSSFEMVV GEGAAKSYTA  300
LALKAMSRHF CSLRDAIVSH IYAEKRKLLQ DVPKISSGLS QLNLFDRECR HKRMSLQQLG  360
IFQSQRQAFR PIRGLPETSV AILRTWLFEH FLHPYPNDSE KLLLASQTGL SKNQVSNWFI  420
NARVRLWKPM IEEMYKEEFG ESSEDSNSLA GGSMTGEGNT DHTED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A4e-16375432158Homeobox protein Meis1
4xrs_B4e-16375432158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008221348.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221348.10.0PREDICTED: BEL1-like homeodomain protein 11
SwissprotQ1PFD11e-104BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLM5XRQ50.0M5XRQ5_PRUPE; Uncharacterized protein
STRINGXP_008221348.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126452329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-107BEL1-like homeodomain 11