PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008221514.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 231aa    MW: 26646 Da    PI: 5.577
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008221514.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM105.95.1e-33411713128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevl 93 
                     +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp+   k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g+++ev+
  XP_008221514.1  41 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYDHDPDELPNgdfKHGLDCNEAFYFAYTEQVYSSrGKITRRTTKSGYWDLDGEEEEVK 135
                     7*********************************************5444444467799********99963777888****************9 PP

             NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + ++ +vg  k++vf+kg+ap+g +td +mheyr+
  XP_008221514.1 136 YRnGDITVGFEKVMVFHKGTAPNGIETDFIMHEYRV 171
                     9856677***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.45E-3439200IPR003441NAC domain
PROSITE profilePS5100535.33239200IPR003441NAC domain
PfamPF023652.5E-1641171IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MPYSSSFIEQ SFSHNSPTQT QTKAQCSKIE NGKKEAEIHL VGYRFDPSED QIVVFYLFNK  60
ILGRELPIND IIKEISVYDH DPDELPNGDF KHGLDCNEAF YFAYTEQVYS SRGKITRRTT  120
KSGYWDLDGE EEEVKYRNGD ITVGFEKVMV FHKGTAPNGI ETDFIMHEYR VNPLIVPTHV  180
LNDSIRAKIE RYVVCRIIHE GVSNFPRTNF HQDGLLGLLK KQNQIDMTEI A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-233520010168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008221514.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221514.11e-174PREDICTED: NAC transcription factor 29-like isoform X2
TrEMBLA0A251R4N81e-167A0A251R4N8_PRUPE; Uncharacterized protein
STRINGXP_008221511.11e-167(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.13e-28NAC-like, activated by AP3/PI