PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_008223651.1

Organism

Prunus mume

Taxonomic ID

102107

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 198aa MW: 23121.5 Da PI: 9.8001

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_008223651.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	57	6.5e-18	7	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk..leleev.ikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgk 88 p GfrF+P+dee+v +L + + ++k ++l + ++ +++ +++eP+++ kk+ + ++++yf sk +k ++ ++ +r+ + g+W++t + XP_008223651.1 7 PFGFRFRPSDEEIVGSFLYPFLVESKpfMSLYNNfFRACNLfgNNTEPSEIWKKYGGpqlVDTDLYFISKLKKLTP-KRMDRRIGNGGTWSETES 100 89****************97776657555444488888733589*8544433224557777777766554.5566668999**** PP NAM 89 dkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +k v++k + + +g k+ + + + + + +t W+++ey+l XP_008223651.1 101 SKLVHEKvsgnpNPNPIGRKRKFRYEN--KGSEDHTGWLLDEYSL 143 999877666667****984..334469******97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.44E-20	4	167	IPR003441	NAC domain
PROSITE profile	PS51005	22.675	6	168	IPR003441	NAC domain
Pfam	PF02365	9.8E-14	7	143	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence Send to blast
MEESLVPFGF RFRPSDEEIV GSFLYPFLVE SKPFMSLYNN FFRACNLFGN NTEPSEIWKK 60 YGGPQLVDTD LYFISKLKKL TPKRMDRRIG NGGTWSETES SKLVHEKVSG NPNPNPIGRK 120 RKFRYENKGS EDHTGWLLDE YSLFDGPKND YNQRGYDFDF VICRMRKNDR VGIKNHRLNK 180 AALPVQLVVI LWALIRLI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_008223651.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008223651.1	1e-145	PREDICTED: NAC domain-containing protein 37-like
TrEMBL	M5XHJ7	1e-123	M5XHJ7_PRUPE; Uncharacterized protein (Fragment)
TrEMBL	M5XIT6	1e-123	M5XIT6_PRUPE; Uncharacterized protein (Fragment)
STRING	XP_008223651.1	1e-145	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF19036	2	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56530.1	5e-09	NAC domain containing protein 64