PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008225750.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 221aa    MW: 25965.1 Da    PI: 7.6818
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008225750.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.51.3e-15101404128
             NAM   4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdk 90 
                      f+FhPtd+e++   L k v + +    + + ++++ d++ + e w++ +   + + +++++yf ++ ++ +  ++r++r + ++g+W++    k
  XP_008225750.1  10 AFHFHPTDQEIIRSILYKMVIEGEplnPSYHGIVHDEDLFGTkELWKIWEdygRDQLHDQDLYFLCQLKRINYCSSRTHRrIGREGTWSQRVAPK 104
                     69***************99766665755555679999*998857799964344434477899******9999998988886889*********** PP

             NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++ + + +g  + L + +   ++ + ++W+++ey+l
  XP_008225750.1 105 LIYDGNPNPIGSVRKLRYKN--PKSEHDAEWFLDEYSL 140
                     ****9999**********84..444459********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.27E-174163IPR003441NAC domain
PROSITE profilePS5100522.0457164IPR003441NAC domain
PfamPF023653.9E-1110140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MANSRNVSLA FHFHPTDQEI IRSILYKMVI EGEPLNPSYH GIVHDEDLFG TKELWKIWED  60
YGRDQLHDQD LYFLCQLKRI NYCSSRTHRR IGREGTWSQR VAPKLIYDGN PNPIGSVRKL  120
RYKNPKSEHD AEWFLDEYSL FVGDDGHDQT TPGFDFVVCR LRRNHNKFDR IRASVHKKTN  180
KAPQQIHERK RKSMNVVINI DDEEEEEVHG CSSAKSHSCT L
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008225750.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008225750.11e-167PREDICTED: NAC domain-containing protein 101-like
TrEMBLA0A314XGU31e-142A0A314XGU3_PRUYE; NAC domain-containing protein 101-like
STRINGXP_008225750.11e-167(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.11e-08Arabidopsis NAC domain containing protein 87