PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008226305.2
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 237aa    MW: 27511.7 Da    PI: 6.5836
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008226305.2genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.11.9e-2471381128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgyWka 85 
                     +p+G++F+P++eel  +yL ++++g++ ++  v++++d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r++    +g+Wk 
  XP_008226305.2   7 VPVGYKFRPSEEELFLHYLLPRLNGEDYPE-GVVPDCDLYGTkEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGVWKG 98 
                     599************************999.99*******9879****7423322..24355688******************643344999*** PP

             NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + k++ +  g+++g++k + + +  +p+    +W+mhe++l
  XP_008226305.2  99 EDSGKKIRA-CGSNIGIRKRFRYMNPGSPH--DDRWIMHEFQL 138
                     ********9.999***********655555..89*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-304159IPR003441NAC domain
PROSITE profilePS5100530.0937159IPR003441NAC domain
PfamPF023656.1E-168138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MGGYYQVPVG YKFRPSEEEL FLHYLLPRLN GEDYPEGVVP DCDLYGTKEP WEIWRDFHHS  60
SPDDQEDIYV FTTLKKKTPN GSRFCRTVGA AGTGVWKGED SGKKIRACGS NIGIRKRFRY  120
MNPGSPHDDR WIMHEFQLDE SLLRVRNKET IVLCLVRKKE TPGKRKFEEL QNHEDVPPRG  180
EIQAQHVHDD QQHHIGPSTY DELRVLDLMN YVEGEDNMVN PTLXCTVRSA GASWHKY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-17716517171NO APICAL MERISTEM PROTEIN
1ut4_B8e-17716517171NO APICAL MERISTEM PROTEIN
1ut7_A8e-17716517171NO APICAL MERISTEM PROTEIN
1ut7_B8e-17716517171NO APICAL MERISTEM PROTEIN
3swm_A9e-17716520174NAC domain-containing protein 19
3swm_B9e-17716520174NAC domain-containing protein 19
3swm_C9e-17716520174NAC domain-containing protein 19
3swm_D9e-17716520174NAC domain-containing protein 19
3swp_A9e-17716520174NAC domain-containing protein 19
3swp_B9e-17716520174NAC domain-containing protein 19
3swp_C9e-17716520174NAC domain-containing protein 19
3swp_D9e-17716520174NAC domain-containing protein 19
4dul_A8e-17716517171NAC domain-containing protein 19
4dul_B8e-17716517171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008226305.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934141e-173KT893414.1 Prunus persica cultivar Xiaobaitao NAC66 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008226305.21e-178PREDICTED: LOW QUALITY PROTEIN: NAC domain-containing protein 66-like
TrEMBLA0A251PKX61e-158A0A251PKX6_PRUPE; Uncharacterized protein
STRINGXP_008226305.11e-167(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61910.13e-22NAC domain protein 66