PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_008226456.1

Organism

Prunus mume

Taxonomic ID

102107

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NZZ/SPL

Protein Properties

Length: 447aa MW: 48759.2 Da PI: 7.9114

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_008226456.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	22.6	1.8e-07	28	80	50	102
NOZZLE 50 ktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrl 102 + + kqkk rg+gva+le+ ++e+++kk ++a + t s +++ ++t XP_008226456.1 28 SSKKTKQKKVPQRGLGVAQLEKIRLEDQQKKAAAAVILSTPSSLSSPTKSTSS 80 45567899999*************************99999999998888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence Send to blast
MAQEDQTQKC SNTSSGASLG FASITRSSSK KTKQKKVPQR GLGVAQLEKI RLEDQQKKAA 60 AAVILSTPSS LSSPTKSTSS SCPSVPIRHF YHSNHNQPPS SIPFPSLPSL DLPSPNSIFR 120 PPLIPTQNID VIRKPISTVP WGNNNNNNGG HGFEIQGHGN NNVPNLWNPC DFNLDQKESS 180 NSGIDPGLAF RSTLNLPFES NNPIWPLTNV PQRTQPYHQQ PPPPPSMVNV SSTTSSSSVL 240 NFQIEPPSNQ SYYSNCTPMW PDEEKMVGMK RPYPFSLDNP PGPSINFKFP TFVAPMRADE 300 ASSCGNRCTY NLEPSGNPIF REAPSCSTSI SESNSRNSIK ENGSVNGDFL TLAPPTTSSR 360 TCPSPKLNLP STYLAFHNRE VPEFESFSYQ GNAEDTNFQP GPSCSHPQQA FYSFFPPAKA 420 QIGRAVTTIN NNCNGELGES VDLNLKL

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence Send to blast

MAQEDQTQKC SNTSSGASLG FASITRSSSK KTKQKKVPQR GLGVAQLEKI RLEDQQKKAA  60
AAVILSTPSS LSSPTKSTSS SCPSVPIRHF YHSNHNQPPS SIPFPSLPSL DLPSPNSIFR  120
PPLIPTQNID VIRKPISTVP WGNNNNNNGG HGFEIQGHGN NNVPNLWNPC DFNLDQKESS  180
NSGIDPGLAF RSTLNLPFES NNPIWPLTNV PQRTQPYHQQ PPPPPSMVNV SSTTSSSSVL  240
NFQIEPPSNQ SYYSNCTPMW PDEEKMVGMK RPYPFSLDNP PGPSINFKFP TFVAPMRADE  300
ASSCGNRCTY NLEPSGNPIF REAPSCSTSI SESNSRNSIK ENGSVNGDFL TLAPPTTSSR  360
TCPSPKLNLP STYLAFHNRE VPEFESFSYQ GNAEDTNFQP GPSCSHPQQA FYSFFPPAKA  420
QIGRAVTTIN NNCNGELGES VDLNLKL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_008226456.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008226456.1	0.0	PREDICTED: rho GTPase-activating protein gacII-like
TrEMBL	A0A314XZ00	0.0	A0A314XZ00_PRUYE; Uncharacterized protein
STRING	XP_008226456.1	0.0	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8956	12	13