PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008227089.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 376aa    MW: 42021.4 Da    PI: 4.5822
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008227089.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.57.1e-25101421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                     lp+Gf+F+P+d++l+ +yL +kv+g+++  e+vi+e+d+y k+ePwd+      +  a+ +++yfF+k ++ + +++r  r++ sg+Wk   + +
  XP_008227089.1  10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYENVIPEMDLYgKIEPWDIWYeyggHNLAKGEDLYFFTKLKSLSDKDSRVARTIGSGTWKGENSGT 104
                     79*************************99999******99568*****742444222366799**************************999999 PP

             NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +v +   ++++ g+ k + +   + ++ +   W+mhey+l
  XP_008227089.1 105 TVSDPknEENDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142
                     999885566679999998886..566667999******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.4E-305164IPR003441NAC domain
PROSITE profilePS5100529.22910165IPR003441NAC domain
PfamPF023651.4E-1611142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MAPCASVVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWYE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRVAR TIGSGTWKGE NSGTTVSDPK NEENDLGIWK  120
RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE  180
TDTPVQSQNK RQRPQQVTRF EELIGNCTPM SEATGVGGSV SYLPTELTQS QPDSSFAYPT  240
TVVSSQARAN YTDDVSQFHG GGDGNALMSD FSHLDTAQSF TEQALGSHAV CNQERASDAY  300
ETQQGLGLTD NNIGHWPSPF GSEEDQVNAL DFSIDYELLI HLIDCDDGPP QSSTAQFMGM  360
ENTTTASSEA NMVIID
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-14817115171NO APICAL MERISTEM PROTEIN
1ut4_B9e-14817115171NO APICAL MERISTEM PROTEIN
1ut7_A9e-14817115171NO APICAL MERISTEM PROTEIN
1ut7_B9e-14817115171NO APICAL MERISTEM PROTEIN
4dul_A9e-14817115171NAC domain-containing protein 19
4dul_B9e-14817115171NAC domain-containing protein 19
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166172RGKRKLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008227089.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934130.0KT893413.1 Prunus persica cultivar Jinliuzaohong NAC68 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008227089.10.0PREDICTED: NAC transcription factor 29-like
TrEMBLA0A314UHD90.0A0A314UHD9_PRUYE; NAC transcription factor 29-like
STRINGXP_008227089.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.13e-18NAC domain containing protein 86