PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008227744.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 391aa    MW: 44188.6 Da    PI: 5.3371
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008227744.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573811.7e-25166258498
          DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97 
                      r+wse De+v+ +G+i+f +k    ++ d ++fy+ ++k i+++vs+ q+ +K+ rLKkK+++++++   +g++p+fsk+h+qk f+lsk  Wg
  XP_008227744.1 166 ARVWSERDELVMVKGIISFLKK---FSTFDGKKFYNWINKYIEADVSRGQIADKVCRLKKKYRNNEANrGPNGEDPVFSKPHEQKLFDLSKLAWG 257
                     69*****************443...45679*********************************99988689***********************8 PP

          DUF573  98 s 98 
                     s
  XP_008227744.1 258 S 258
                     5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.4E-21166257IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MAFSQSSSSS YDSSSYSSSS SFDEDHQSDS YDDEPEDEQL APDSQESPTL VGSDTEYRCE  60
SEPDSEADSA KKTKTKTKSN TKTKTNTNVE AKSKNKSPSP TAVVNKKRPR EKPEEKACDA  120
SNEKRKKAEN ETNLQTGGDD AMEKDKEMKK KKKNKSRSSS SAAANARVWS ERDELVMVKG  180
IISFLKKFST FDGKKFYNWI NKYIEADVSR GQIADKVCRL KKKYRNNEAN RGPNGEDPVF  240
SKPHEQKLFD LSKLAWGSIS CTTNHNNTNA DIIDGVVEEG ADAEKKATDD VDDAEKKATD  300
VVDDAQKKAT DDDILQEKEV LFDDNLVIEA FDKYLTSRGL DLRWFGQDKL ESLENKWRKI  360
RVAESTFRLL QAKFDAKLHQ IALHAYNFFD Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105126KKRPREKPEEKACDASNEKRKK
2143152KDKEMKKKKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008227744.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008227744.10.0PREDICTED: uncharacterized protein LOC103327231
TrEMBLM5X1D90.0M5X1D9_PRUPE; Uncharacterized protein
STRINGXP_008227744.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2838433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.11e-17DNA-binding storekeeper protein-related transcriptional regulator