PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008227964.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 298aa    MW: 34373.4 Da    PI: 5.0236
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008227964.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.31.5e-1981403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkk....leleevikevd.iykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 
                      GfrF+Ptd+el++++L kk+ +k+       +++++e++ + ++ePw    ++ +    ++++yfFs+ ++ +++gkr +r + + g+W++  +
  XP_008227964.1   8 LGFRFRPTDQELLSYFLYKKAITKDplmaSYYSSIVREFNfLGETEPWVVWDQFGGpglVDEDLYFFSELKTLSKKGKRIKRkIEAGGTWSEAFS 102
                     6*******************8888866642333468999736799*****74443333367899******************5555899*98876 PP

             NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k++++k +g+ +g k+ L + +  +   ++ +W+++ey+l
  XP_008227964.1 103 -KNIYDKtTGNPIGQKRNLRYEN--QGCEHHGKWLLEEYSL 140
                     .77887768999********984..4444589*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-195155IPR003441NAC domain
PROSITE profilePS5100525.0166156IPR003441NAC domain
PfamPF023652.3E-159140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MANNNRLLGF RFRPTDQELL SYFLYKKAIT KDPLMASYYS SIVREFNFLG ETEPWVVWDQ  60
FGGPGLVDED LYFFSELKTL SKKGKRIKRK IEAGGTWSEA FSKNIYDKTT GNPIGQKRNL  120
RYENQGCEHH GKWLLEEYSL LNKEAQKIVL CRLKKNSRVS NKRNNSTQEF KEKPSNKKAR  180
KELASATVKI DDEQPQRSSS LSSVVNNHDQ ELIFDINYNA ISNYLCGDDQ DNIDDPFDYG  240
CLTDEEYAID MDALLGAPPL SQELPHIDET LRVEAMNSSG LENICNQQLD DITYWFNN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008227964.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008227964.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A314XQ771e-145A0A314XQ77_PRUYE; NAC domain-containing protein 41-like
STRINGXP_008227964.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.14e-10NAC domain containing protein 83