PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_008228573.1

Organism

Prunus mume

Taxonomic ID

102107

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 515aa MW: 56845.6 Da PI: 6.6783

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_008228573.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.6	3.7e-10	212	252	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L XP_008228573.1 212 KTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQDL 252 788*************************9877777766666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-7	208	271	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.174	210	254	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.0E-7	212	253	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.06E-6	212	254	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.5E-7	213	255	No hit	No description
PROSITE pattern	PS00036	0	215	230	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	5.6E-32	293	368	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence Send to blast
MAFISATCPD SSFFLEYKDE NGLRKSCMAS HRVGETATGL SESGPSNHHV PYAVLHGMNA 60 PSTSFLNQEG SAFDFGELEE AIARQVRNDE AQAPLFTGRP AATLEMFPSW PMRFHQTPRG 120 SSKSGGESTD SGSQVNTLTS KGEGGQLEPE SPISKKASSS DHQQAFDQKH LQFQQQQQLQ 180 AQDMAISDSS RGGAGAVGAS QSQSAAKPSQ EKTLRRLAQN REAARKSRLR KKAYVQQLET 240 SRIKLTQLEQ DLQRARAQGL FLGGCGGGLG NISSGAAIFD MEYARWLEDD HRHMSELRTG 300 LQAHLSDSDL RVIVDGYISH YDEIFQLKGV AAKSDVFHLI TGMWTTPAER CFLWMGGFRP 360 SELIKMLTAQ LDPLTEQQFM GIYSLQQSSQ QAEEALTQGL EQLHQSLVDT IAGGPVIDGM 420 QQMAVALGKL TNLEGFVRQA DNLRQQTLHQ LRRILTVRQA ARCFLVIGEY YGRLRALSSL 480 WASRPRESMI SDDNSCQTTT DLQMVQTSQN HFASF

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence Send to blast

MAFISATCPD SSFFLEYKDE NGLRKSCMAS HRVGETATGL SESGPSNHHV PYAVLHGMNA  60
PSTSFLNQEG SAFDFGELEE AIARQVRNDE AQAPLFTGRP AATLEMFPSW PMRFHQTPRG  120
SSKSGGESTD SGSQVNTLTS KGEGGQLEPE SPISKKASSS DHQQAFDQKH LQFQQQQQLQ  180
AQDMAISDSS RGGAGAVGAS QSQSAAKPSQ EKTLRRLAQN REAARKSRLR KKAYVQQLET  240
SRIKLTQLEQ DLQRARAQGL FLGGCGGGLG NISSGAAIFD MEYARWLEDD HRHMSELRTG  300
LQAHLSDSDL RVIVDGYISH YDEIFQLKGV AAKSDVFHLI TGMWTTPAER CFLWMGGFRP  360
SELIKMLTAQ LDPLTEQQFM GIYSLQQSSQ QAEEALTQGL EQLHQSLVDT IAGGPVIDGM  420
QQMAVALGKL TNLEGFVRQA DNLRQQTLHQ LRRILTVRQA ARCFLVIGEY YGRLRALSSL  480
WASRPRESMI SDDNSCQTTT DLQMVQTSQN HFASF

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_008228573.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008228573.1	0.0	PREDICTED: transcription factor TGA2 isoform X2
Swissprot	Q93XM6	0.0	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A251NPJ0	0.0	A0A251NPJ0_PRUPE; Uncharacterized protein
STRING	XP_008228563.1	0.0	(Prunus mume)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]