PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008229046.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 155aa    MW: 17729.3 Da    PI: 7.8371
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008229046.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.52.1e-22101402128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP..wdLpkkvkaeekewyfFskrdkkyatgkrknratksgy..Wkatgkdkev 92 
                      +G+rF+P + el+ +yL +kv+g +l+  +++ e+d+y  e   ++L    +++e+++yfF++ +kk+ +g+r +r+ + g   W+++ ++   
  XP_008229046.1  10 LVGCRFEPYEAELLAHYLYNKVNGLPLSS-NAVIECDLYGEEEiwRKLF--DETGETSLYFFTELKKKTGKGSRVERMSSGGCvtWRNQSNKVIC 101
                     68************************999.778899**98864213443..34578899******************888775569988775444 PP

             NAM  93 lsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++    ++ ++g k+++ +  +++++  k +Wvmhe+ l
  XP_008229046.1 102 VNDnepNKIVIGYKRMFSYVPKKTSTIAKGEWVMHEFWL 140
                     4436667777**********99***************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.26E-234143IPR003441NAC domain
PROSITE profilePS5100523.3059155IPR003441NAC domain
PfamPF023651.7E-1411138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
METTRSLGLL VGCRFEPYEA ELLAHYLYNK VNGLPLSSNA VIECDLYGEE EIWRKLFDET  60
GETSLYFFTE LKKKTGKGSR VERMSSGGCV TWRNQSNKVI CVNDNEPNKI VIGYKRMFSY  120
VPKKTSTIAK GEWVMHEFWL AGCLVNNNNQ PSLIN
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008229046.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008229046.11e-113PREDICTED: NAC domain-containing protein 79-like
TrEMBLA0A314YZH49e-88A0A314YZH4_PRUYE; NAC domain-containing protein 79-like
STRINGXP_008229046.11e-112(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1763745
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-15NAC domain containing protein 47