PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008233225.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 424aa    MW: 45464.6 Da    PI: 8.8928
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008233225.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_172.65.5e-23282344163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN aLk+e+++l++++++lk e+
  XP_008233225.1 282 ERELKRERRKQSNRESARRSRLRKQAETEELARKVDALSAENVALKSEISRLTENSSTLKLEN 344
                     89**********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.5E-33198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.4E-24129261No hitNo description
Gene3DG3DSA:1.20.5.1703.7E-18276341No hitNo description
PfamPF001703.0E-21282344IPR004827Basic-leucine zipper domain
SMARTSM003389.0E-22282346IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.116284347IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.75E-11285341No hitNo description
CDDcd147022.41E-20287335No hitNo description
PROSITE patternPS000360289304IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MGNDDNGKSA KSEKSSSPLT ADQTNHSNQT NIHVYPDWAA MQAYYGPRVA LPPYYNSAVA  60
SGHAPHPYMW GPPQPMMPPY GTPYAAMYSH GYAHPAVPLG SHGQAVPSSP SAATPLNMET  120
PTKSSGTTDR GLMKKLKRFD ALAMSIGNSN VGDAEGGAEH SVSQSLGTEG SSEGSDGNTT  180
GENQTRRKRS RERTPATAGD GKTDMQPSPV SAKEVNAACD KVLGATVAAP SVPGKLVGPV  240
VSPGMTMALE FKNSPNLNSK SSSTSVPQSC AVLPPEAWMH NERELKRERR KQSNRESARR  300
SRLRKQAETE ELARKVDALS AENVALKSEI SRLTENSSTL KLENATLMDK LTNTRVGRME  360
EIMMNIDDKR VQPFSTENLL SRVNNSGSIA RDAEKEGDMY EKNSGAKLHQ LLDASPRADA  420
VAAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1298304RRSRLRK
2298305RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008233225.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311454e-52KT031145.1 Glycine max clone HN_CCL_210 BZIP transcription factor (Glyma19g44190.2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008233225.10.0PREDICTED: common plant regulatory factor 1-like
SwissprotQ990891e-148CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLM5X0110.0M5X011_PRUPE; Uncharacterized protein
STRINGXP_008233225.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF53013455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.11e-108G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]