PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008235314.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 181aa    MW: 19965 Da    PI: 10.6569
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008235314.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-204695255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa a+++a+++l+g
  XP_008235314.1 46 HFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAALAYDEAARSLRG 95
                    69*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.08E-2845102No hitNo description
PROSITE profilePS5103221.7246103IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-2146103IPR016177DNA-binding domain
SMARTSM003809.3E-3446109IPR001471AP2/ERF domain
PfamPF008473.1E-134695IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-3046103IPR001471AP2/ERF domain
PRINTSPR003675.4E-104758IPR001471AP2/ERF domain
PRINTSPR003675.4E-106985IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MAVDALHLRK TSLSLAVEPP SPPPRQPPAQ PKHSAHVRGG GAKEAHFRGV RKRPWGRFAA  60
EIRDPWKKTR KWLGTFDTAE EAALAYDEAA RSLRGPKAKT NFGAPASALP HTLVIGGGSE  120
IFWTPPPMYF MGGAPSGAPV RSEYKGYKLE NVDLVVSEQE KKMRKEKKPF LFDLNLPAPL  180
F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-2138118680Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008235314.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3695440.0KT369544.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 12 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008235314.11e-129PREDICTED: ethylene-responsive transcription factor 8-like
TrEMBLM5VU691e-127M5VU69_PRUPE; Uncharacterized protein
STRINGXP_008235314.11e-128(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.17e-25ERF domain protein 12