PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_008235854.1

Organism

Prunus mume

Taxonomic ID

102107

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 136aa MW: 15846.4 Da PI: 10.7442

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_008235854.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	25.9	2.1e-08	35	90	5	60
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 kr++r + NR +A + qRKk+++ Le + L e aL +l+ + + + XP_008235854.1 35 KRAKRIMTNRRSAMKAKQRKKMYVSALEYNLERLYCEAAALSARLNLWMTDALYIH 90 9*********************************************9988776655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0057	31	95	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.77E-8	35	84	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.9E-6	35	90	No hit	No description
CDD	cd14703	1.08E-13	36	85	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence Send to blast
MADSTPPKNH SASSITGMKK NPPAVLADMA RHDPKRAKRI MTNRRSAMKA KQRKKMYVSA 60 LEYNLERLYC EAAALSARLN LWMTDALYIH ADNKRLRQCL HHIVQQIRLQ DTLMDETQKE 120 IQDLKRFVWS HKTSKN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_008235854.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008235854.1	6e-98	PREDICTED: transcription factor RF2a-like
TrEMBL	A0A251MZV3	2e-94	A0A251MZV3_PRUPE; Uncharacterized protein
STRING	XP_008235854.1	2e-97	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF22886	4	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	3e-20	bZIP family protein