PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008236375.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 302aa    MW: 32973.6 Da    PI: 7.065
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008236375.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding62.58.8e-202267147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W+++Ede+l ++v+ +G ++W++I++ ++ gR++k+c++rw + 
   XP_008236375.1 22 KGPWSPDEDEKLRQLVQHHGARNWSLISKSVP-GRSGKSCRLRWCNQ 67
                     79******************************.***********985 PP
2Myb_DNA-binding56.37.3e-1876118347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eEde+++ a++++G++ W+tIar ++ gRt++ +k++w++ 
   XP_008236375.1  76 AFTPEEDEIIAGAHAKYGNK-WATIARLLN-GRTDNAIKNHWNST 118
                      79******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129427.1381772IPR017930Myb domain
SuperFamilySSF466891.01E-3119115IPR009057Homeodomain-like
SMARTSM007175.4E-172170IPR001005SANT/Myb domain
PfamPF002491.6E-192267IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.3E-262374IPR009057Homeodomain-like
CDDcd001671.29E-162466No hitNo description
SMARTSM007175.1E-1473121IPR001005SANT/Myb domain
PROSITE profilePS5129419.73974123IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.1E-2375122IPR009057Homeodomain-like
PfamPF002494.3E-1576118IPR001005SANT/Myb domain
CDDcd001679.18E-1276119No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDQRESAMDS SAQAQRELDR VKGPWSPDED EKLRQLVQHH GARNWSLISK SVPGRSGKSC  60
RLRWCNQLSP EVEHRAFTPE EDEIIAGAHA KYGNKWATIA RLLNGRTDNA IKNHWNSTLK  120
RKFSAISGND DGATIDDNHV RPEKKTATAA VSFSGLCYSP GSPSGSDVSD SGAPAISSSH  180
VFRPVARTGG VLTRESPPSQ NDSKNEAHEP STLLTLSLPG VDDTPSHELP ILESAARRVE  240
GTASLQPETS NAGNTMSFGT EFLSVMQEMI RTEVRSYMEG MCLHSEGVRN AGVKRIAIRK  300
LD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A5e-39191234108B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that functions in salt stress response. Acts as negative regulator of NHX7/SOS1 and CBL4/SOS3 induction in response to salt stress (PubMed:23809151). In response to auxin, activates the transcription of the auxin-responsive gene IAA19. The IAA19 transcription activation by MYB73 is enhanced by direct interaction between MYB73 and PYL8 (PubMed:24894996). {ECO:0000269|PubMed:23809151, ECO:0000269|PubMed:24894996}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008236375.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salt stress. {ECO:0000269|PubMed:23809151}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008236375.10.0PREDICTED: transcription factor MYB44-like
SwissprotO231601e-86MYB73_ARATH; Transcription factor MYB73
TrEMBLA0A251MZK20.0A0A251MZK2_PRUPE; Uncharacterized protein
STRINGXP_008236375.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84334124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.16e-80myb domain protein 73
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]