PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008237492.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 214aa    MW: 24254.5 Da    PI: 11.1053
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008237492.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.88.8e-12108153550
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                     ++ rr+++NRe+ArrsR RK++ +e+L++ v  L  eN++Lk++l+
  XP_008237492.1 108 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRVENRELKNRLS 153
                     5789**************************************9886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-15104168IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.369106169IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.84E-11108156No hitNo description
PfamPF001702.9E-9108154IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-9108154No hitNo description
CDDcd147022.17E-18109153No hitNo description
PROSITE patternPS000360111126IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MLSTVPAMLP SDSLLHFPAF DGGFTPGGGG FTPWDCSELL PAIQSPKPTI STPSSGPVQS  60
TKTVISSSGS DDDPNRSVQP DRMNRTHANA KSCPNGVSNR AVSVVDERKR RRMISNRESA  120
RRSRMRKQKH LENLRNQVNR LRVENRELKN RLSYVLYHFQ RVRTDNDRLQ SEHVLLRQKL  180
SDIRQILVYR QLQHMSSAWP CNTVIPEQTP SLIA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107111RKRRR
2107128RKRRRMISNRESARRSRMRKQK
3120127RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008237492.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008237492.11e-158PREDICTED: light-inducible protein CPRF2
TrEMBLM5WJW11e-135M5WJW1_PRUPE; Uncharacterized protein
STRINGXP_008237492.11e-157(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.24e-35basic leucine-zipper 6