PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008237894.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bZIP
Protein Properties Length: 340aa    MW: 37503.4 Da    PI: 4.4734
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008237894.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15e-10156197445
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     +k+ rr  +N+ AA rsR+RKk+++  Le k+k Le+e ++L
  XP_008237894.1 156 SKKRRRQLRNKDAAVRSRERKKMYVRDLEMKSKYLEGECRRL 197
                     6999**********************************9866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-4152217IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.2E-11152212No hitNo description
PROSITE profilePS502179.473155197IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.19E-10157212No hitNo description
PfamPF001703.7E-8157197IPR004827Basic-leucine zipper domain
CDDcd147042.94E-15158209No hitNo description
PROSITE patternPS000360160175IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MELEGDVGFL DSENDIIGEI DWDFLFDGSN ILEDVLELEN PVVTATGSSS PSPSPSSTVE  60
DAPSNSSPDW IGEIETILMK DDDVNGNQVV PDSAEPTNAE FYEKFLADIL VDSPSSDAGS  120
NASADSVKEK LDRSPLNDDD DDDDDTADAD ADDPISKKRR RQLRNKDAAV RSRERKKMYV  180
RDLEMKSKYL EGECRRLGRL LQCCYAENHA LRLGLQMNNA YGHGHGVLAT KQESAVLLLE  240
LLLLGSLLRC LDIMCLVALP LILMAGLRNP LNNVTANKDL ESVDLRPRGA ASKMFQHSVL  300
QCFSKSRRCK ASRTKMKPSR FPCLLGSYVS FALPLLMLAT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008237894.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3739721e-112KT373972.1 Pyrus pyrifolia cultivar mixueli putative bZIP transcription 60 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008237894.10.0PREDICTED: bZIP transcription factor 60
TrEMBLM5W9Y40.0M5W9Y4_PRUPE; Uncharacterized protein
STRINGXP_008237894.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.13e-09basic region/leucine zipper motif 60