PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_008240060.1

Organism

Prunus mume

Taxonomic ID

102107

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 176aa MW: 20142.5 Da PI: 7.809

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_008240060.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49	1.4e-15	73	131	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r +r+++NRe+ArrsR RKk++ieeL+ v++L a N++L ++l +l + ++ +e+ XP_008240060.1 73 RRLKRMISNRESARRSRMRKKKQIEELQYQVDQLHATNRQLSEKLIQLLEGNQQILQEN 131 689*********************************************99999999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.3E-13	66	133	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.898	71	134	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.5E-12	72	127	No hit	No description
SuperFamily	SSF57959	9.38E-12	73	124	No hit	No description
Pfam	PF00170	4.0E-14	73	131	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.16E-15	74	122	No hit	No description
PROSITE pattern	PS00036	0	76	91	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence Send to blast
MEPNESKGLH YLTSHSIPTQ SHPNPVHNLD SISLCPTRFF PLSHIHDFSP NTSSLSNETA 60 FDEAGEQSIN YERRLKRMIS NRESARRSRM RKKKQIEELQ YQVDQLHATN RQLSEKLIQL 120 LEGNQQILQE NAQLKERLSS LQILLADLIT PLRNVGDVTT TNTNGNRLRA EDSSTP

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_008240060.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008240060.1	1e-127	PREDICTED: basic leucine zipper 43-like
TrEMBL	M5WVR4	1e-121	M5WVR4_PRUPE; Uncharacterized protein
STRING	XP_008240060.1	1e-126	(Prunus mume)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13044	24	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	6e-34	basic leucine-zipper 70