PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008242158.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 168aa    MW: 19625.6 Da    PI: 10.2428
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008242158.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.3e-15115161147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++l++++ +q+G+g+W++I+r    +Rt+ q+ s+ qky
   XP_008242158.1 115 RTPWTKHEHKLFLKGLEQYGKGDWRSISRFCVVTRTPTQVASHAQKY 161
                      789**************************9999*************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.02E-72889IPR009057Homeodomain-like
SMARTSM007170.0233183IPR001005SANT/Myb domain
PROSITE profilePS500904.3683581IPR017877Myb-like domain
CDDcd001670.008763581No hitNo description
PROSITE profilePS5129415.78110166IPR017930Myb domain
SuperFamilySSF466897.11E-18111167IPR009057Homeodomain-like
SMARTSM007176.5E-11114164IPR001005SANT/Myb domain
TIGRFAMsTIGR015578.6E-17114164IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.4E-11115160IPR009057Homeodomain-like
PfamPF002493.8E-12115161IPR001005SANT/Myb domain
CDDcd001671.46E-10117162No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
METLCFSKGP LCYPSRFSNN LSRPLQLEKP SDDQWTFDEN KKFENALTEL NLDAPHLFQK  60
LSTRVPGKTV AQIKKHFEAL FEDILMIESG HIAVPEYNKI STESKVTSKP FRRRRTPWTK  120
HEHKLFLKGL EQYGKGDWRS ISRFCVVTRT PTQVASHAQK YFLRINKP
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008242158.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008242158.11e-124PREDICTED: transcription factor DIVARICATA-like
SwissprotQ8S9H72e-38DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLM5VUA31e-112M5VUA3_PRUPE; Uncharacterized protein (Fragment)
STRINGXP_008242158.11e-123(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1862266
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.12e-40MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]