PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008243428.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 549aa    MW: 61064.2 Da    PI: 5.6388
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008243428.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like56.27.8e-18191244155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k r +WtpeLH +F  a++ L G  k  Pk+il+lm+v+ +t+ +v+SHLQ  R+
  XP_008243428.1 191 KHRAVWTPELHLKFTAALSAL-GDLKSRPKAILKLMNVPNITVRQVASHLQVQRI 244
                     6899*****************.9999*************************8875 PP
2Response_reg40.61.3e-1487938109
                     HH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
    Response_reg  38 ll..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                     ++  ++ d+ l++  i+mp+md l +l+ ++++e  +p+i+++++ + + a++al  Ga  fl+Kp++ e+l  
  XP_008243428.1   8 MImeQKDDYKLVMANINMPDMDSLSFLRVLHKKE--IPVIFMSSEMNVNVAKKALAEGACFFLEKPISLEDLKS 79 
                     45225666***********************988..**********************************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011024.459185IPR001789Signal transduction response regulator, receiver domain
PfamPF000727.9E-11580IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23001.0E-175104No hitNo description
SuperFamilySSF521727.12E-17593IPR011006CheY-like superfamily
CDDcd001565.27E-13584No hitNo description
Gene3DG3DSA:1.10.10.604.0E-18188244IPR009057Homeodomain-like
SuperFamilySSF466892.87E-12190245IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-16191245IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    Send to blast
MASVALSMIM EQKDDYKLVM ANINMPDMDS LSFLRVLHKK EIPVIFMSSE MNVNVAKKAL  60
AEGACFFLEK PISLEDLKSM WQHVYRKIRT PRKYKHKPNC GTKMNSGNDC QGIKINEAGD  120
VLRPPLGGVK RNEAGGECSL ATGHALDIDK QNTCTLTCKA QEASGIKRPI DDKEEQEEVN  180
RDSNGTTGDK KHRAVWTPEL HLKFTAALSA LGDLKSRPKA ILKLMNVPNI TVRQVASHLQ  240
VQRIRGTDTT SLPSSLSRLS NCINRNEFPP AKQSSLVCQY DQRTSSFGVQ GNTAQLDAPN  300
SLITSPILLA GFNNHDYRRQ NLYSGHTILS HYTNHHTNNP SEFYLRSQGQ FQNLNQIRET  360
SSFGYGAGMN EIMNQQPLGI EENSFRTSES HFPSMNYMTP EAAASPYISG NTFQVPNEPS  420
VMNQEQYYTS SLTGPFDSQN QNQFSTEGAR LTTELLEFVP EQIASGNTTN PNKFPADFND  480
GSQKLDTTAG EASSPNENQP LSEYDELLKL LEEDPQEASC VGSVPNAGDA DRYCEWLRET  540
LLENSTDPL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008243428.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008243428.10.0PREDICTED: two-component response regulator ORR24
TrEMBLM5XWH80.0M5XWH8_PRUPE; Uncharacterized protein
STRINGXP_008243428.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144041618
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68210.11e-32pseudo-response regulator 6