PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008245708.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 351aa    MW: 39424.8 Da    PI: 4.6645
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008245708.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM782.2e-24101421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                     lp+G+ F+P+d++l+ +yL kk +g++l+ e+vi+e+d+y k+ePwd+ +     k  a+ +++yfF+k ++   +++r  r++ sg+Wk   + 
  XP_008245708.1  10 LPVGYTFRPSDDQLLEHYLLKKNSGEPLQYENVIPEMDLYgKIEPWDIWHecgghK-LAKGEDLYFFTKLKSLGDKDTRVARTIGSGTWKGENSG 103
                     799***************************99******99568*****74345432.2366799**************************99999 PP

             NAM  90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++v +   k+++ g+ k + +   + ++ +   W+mhey+l
  XP_008245708.1 104 TTVSDPnnKEKDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142
                     9999886566779999998886..566667999******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.4E-307164IPR003441NAC domain
PROSITE profilePS5100528.67110165IPR003441NAC domain
PfamPF023652.4E-1611142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MAPREFVFNL PVGYTFRPSD DQLLEHYLLK KNSGEPLQYE NVIPEMDLYG KIEPWDIWHE  60
CGGHKLAKGE DLYFFTKLKS LGDKDTRVAR TIGSGTWKGE NSGTTVSDPN NKEKDLGIWK  120
RFHYENPKSV QDGCWIMHEY SLHPSLVKTK SNSTNQFVLC RIRKNDRGKG KLTTAEEDNK  180
TDTPVQSQNK RQRPQQVTSF EELIGDCTPM SKATGVGGSV SYLPTELTQS QPDRSFACPT  240
TVVSSQAREN YTETQQALGL YAVCNQERAS DIYETQQGLG LIDNDIGYWP SPFGSEEDQV  300
NALDFSIDYD LLNHLINCDD GPPQSSTAQF MGMGMENTST AISEANMVII D
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-16816213165Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008245708.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934120.0KT893412.1 Prunus persica cultivar Xiaobaitao NAC68 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008245708.10.0PREDICTED: NAC domain-containing protein 74-like
TrEMBLM5WM900.0M5WM90_PRUPE; Uncharacterized protein
STRINGXP_008245708.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.25e-18NAC domain containing protein 47