PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008245774.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 249aa    MW: 28278.7 Da    PI: 7.0977
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008245774.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.46.5e-24101421128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                     lp+Gf F P+d++l+ +yL +k +gk+++ ++vi+e+d+y k+ePwd+ +    +  a+ +++yfF+k ++ + +++r  r++ sg+Wk   + +
  XP_008245774.1  10 LPVGFIFCPRDDQLLGYYLLNKDSGKPFQYDNVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRVARTIGSGTWKGENSGT 104
                     799***************************999*****99568*****742444222366799**************************999999 PP

             NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +v +   k+++ g+ k + +   + ++ +   W+mhey+l
  XP_008245774.1 105 TVSDPknKKNNLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142
                     999885566668999988876..666667999******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.76E-307164IPR003441NAC domain
PROSITE profilePS5100527.57210165IPR003441NAC domain
PfamPF023652.4E-1511142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MAPCESVVNL PVGFIFCPRD DQLLGYYLLN KDSGKPFQYD NVIPEMDLYG KIEPWDIWHE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRVAR TIGSGTWKGE NSGTTVSDPK NKKNNLGIWK  120
RFHYENPKSV QDGCWIMHEY SLHSSLVKPK PNSTNRFVLC RIRKNGRGKK KLRTAEEDNE  180
TNNPVQSQNT RQRPQQLTSL SEATGIGGSV PFGSEEDQVL NFTDYDSLYH LINCDDVPPQ  240
SSTAQFMGM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A6e-1441429140Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166172RGKKKLR
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_008245774.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934120.0KT893412.1 Prunus persica cultivar Xiaobaitao NAC68 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008245774.10.0PREDICTED: NAC domain-containing protein 101-like
TrEMBLA0A314YVP81e-135A0A314YVP8_PRUYE; NAC transcription factor 29-like
STRINGXP_008245774.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-18NAC-domain protein 101