PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009588241.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 157aa    MW: 17954.3 Da    PI: 8.0242
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009588241.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.51.4e-121259253
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53
                     ++GVr +k +g++ AeI++ +     + k ++lg+f taeeA++ +   ++++
  XP_009588241.1 12 LFPGVRSRK-NGKFCAEIKHpF-----NkKIIWLGTFITAEEAYEVYKSKKLEF 59
                    689***888.8*********55.....34****************998877766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.13E-131152No hitNo description
SuperFamilySSF541714.45E-111163IPR016177DNA-binding domain
PROSITE profilePS5103212.9711269IPR001471AP2/ERF domain
SMARTSM003808.5E-51266IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.2E-131361IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MKSQKRTPKK SLFPGVRSRK NGKFCAEIKH PFNKKIIWLG TFITAEEAYE VYKSKKLEFD  60
KKVMAKNAKK SKKSENSEEE TCSSNKSNGV EERSNSSAGE EQEIGNNSDE ELLMGQWVQI  120
SEEKEVYFSS KLGVPIVDNY GFLLGEFSEL DDLRFCM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009588241.11e-111PREDICTED: ethylene-responsive transcription factor ERF118-like
TrEMBLA0A1J6HS913e-63A0A1J6HS91_NICAT; Ethylene-responsive transcription factor erf118
STRINGXP_009588241.11e-110(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.24e-13ERF family protein