PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009588576.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 177aa    MW: 20172.9 Da    PI: 10.1307
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009588576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.53.4e-10150170323
                     -SS-EEEEEEE--TT-SS-EE CS
            WRKY   3 DgynWrKYGqKevkgsefprs 23 
                     D+++WrKYGqK++kgs++pr+
  XP_009588576.1 150 DKWAWRKYGQKPIKGSPYPRK 170
                     99*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-8141170IPR003657WRKY domain
PROSITE profilePS5081112.725143169IPR003657WRKY domain
SuperFamilySSF1182902.88E-7147169IPR003657WRKY domain
PfamPF031066.2E-6150170IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MEADWDLHAV VRGCTAAVAT TTTTSSSSST ITTISSSTNI HQVDIFICFQ DYFEPKFDTT  60
NVVQELHNLY KPFVIGGLQD LSPHNQTLKQ QQKLHNHQLI TGLIQPKHFT TSKTSASRRT  120
SHTQMSPRIH KRKNKLKKVC QVPAEALSLD KWAWRKYGQK PIKGSPYPRK EEEEKQI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009588576.11e-131PREDICTED: WRKY transcription factor 22-like isoform X2
TrEMBLA0A1S3Y1M31e-121A0A1S3Y1M3_TOBAC; WRKY transcription factor 22-like
STRINGXP_009588575.11e-124(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-18WRKY family protein