PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009588922.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 267aa    MW: 29212.9 Da    PI: 6.8168
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009588922.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.81.3e-14213259248
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                     ++ +r+rr++kNRe+A rsR+RK+a++ eLe  + +Le+eN+ L ke
  XP_009588922.1 213 AAMQRQRRMIKNRESAARSRERKQAYQVELESMAVKLEEENELLLKE 259
                     5789*************************************988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.3E-5212263IPR004827Basic-leucine zipper domain
PfamPF001705.0E-13213259IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.289214259IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.85E-9216260No hitNo description
CDDcd147078.28E-14216243No hitNo description
Gene3DG3DSA:1.20.5.1707.0E-12217259No hitNo description
PROSITE patternPS000360219234IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MASMKLMASS ASRNSDRRKS SASSSSSSST MPHDLQYSNN GSNNSSSNLE ATSVTPDLIF  60
RNVYGESHSN TLLNTEITLL DAAGAITPIS DSETPPATAV TASEVPPVRR TVDDVWREIV  120
EGKREKQRAA VVAGCKEEMM TLEDFLVKAG AVEEEAVAPV QGPEVKVELG TERLSGGIFA  180
FDHSTPYMAT PQQSVPGFGR GKRKAVLEPL DKAAMQRQRR MIKNRESAAR SRERKQAYQV  240
ELESMAVKLE EENELLLKEK PTKRPLT
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009588921.10.0PREDICTED: G-box-binding factor 4-like
RefseqXP_016486649.10.0PREDICTED: G-box-binding factor 4-like
SwissprotP427772e-35GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A1S4BCM70.0A0A1S4BCM7_TOBAC; G-box-binding factor 4-like
STRINGXP_009588921.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-29bZIP family protein