PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009589486.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 221aa    MW: 25511.4 Da    PI: 9.1627
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009589486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.51.1e-11116169457
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                      k+ rr+ +NRe+ArrsR RK++ +e+L++ +  L+  N++L ++   ++ +++
  XP_009589486.1 116 EKKRRRMVSNRESARRSRMRKQKHLENLRNQANRLKVGNRELTNRFRLMTHQCQ 169
                     5899***************************************99999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-10113177IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.025115167IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.18E-10117168No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-9117170No hitNo description
PfamPF001702.0E-8117169IPR004827Basic-leucine zipper domain
CDDcd147021.10E-16118169No hitNo description
PROSITE patternPS000360120135IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MLSTFPATTL PADGLFPHLF PAFDGGFTPW ECIETAFLFP QQVEEEPVIS PKESPPPEPV  60
ISNSGSGSDD SKPNSVHSSS GSDEPSRNNN NNNNNLNCCP DERKRQRTTS NRDIDEKKRR  120
RMVSNRESAR RSRMRKQKHL ENLRNQANRL KVGNRELTNR FRLMTHQCQF VQCDNERLRT  180
ESAVLRQRLE GIRQILLARQ LEQQFNAYSA WACNNMEQRP Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102120RKRQRTTSNRDIDEKKRRR
2129136RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009589486.11e-163PREDICTED: basic leucine zipper 43-like
RefseqXP_016476259.11e-163PREDICTED: basic leucine zipper 43-like
TrEMBLA0A1S4AI191e-162A0A1S4AI19_TOBAC; basic leucine zipper 43-like
STRINGXP_009589486.11e-162(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.22e-36basic leucine-zipper 6