PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009589729.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 164aa    MW: 19161.1 Da    PI: 6.8872
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009589729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM591.7e-18712114128
             NAM  14 lvveyLkkkvegkkleleevikevdiykvePwdL.pkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgk.dkevlskkgelvglkkt 105
                     l+ + L++k ++++l++ + +  ++i+++ P+d+ p ++++ + ke+y  ++r++ y    r+nr +++gyWk     + ++l   + +vg+k+ 
  XP_009589729.1   7 LI-QQLNNKFKNQPLSI-DGLIFANINDFSPQDFfPGEINGgGIKECYVLTPRRRLYGIMPRPNRRARNGYWKLLKCiNDNILG-PDGAVGMKQK 98 
                     44.56999999999999.667788*********955666553667****************************65542777777.7778****** PP

             NAM 106 LvfykgrapkgektdWvmheyrl 128
                     L f++g++++g+kt+W+m ey+l
  XP_009589729.1  99 LFFFEGEQNHGRKTHWCMIEYKL 121
                     *********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.2971148IPR003441NAC domain
PfamPF023658.1E-810121IPR003441NAC domain
SuperFamilySSF1019413.27E-2111146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MVLDSFLIQQ LNNKFKNQPL SIDGLIFANI NDFSPQDFFP GEINGGGIKE CYVLTPRRRL  60
YGIMPRPNRR ARNGYWKLLK CINDNILGPD GAVGMKQKLF FFEGEQNHGR KTHWCMIEYK  120
LRQHCCSIDC DHNIGKLDDW VLCKVYEEYD PEMLSFQMET MDIG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-17414626166Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009589729.11e-121PREDICTED: NAC domain-containing protein 72-like
TrEMBLA0A1S3ZXD41e-106A0A1S3ZXD4_TOBAC; NAC domain-containing protein 72-like
STRINGXP_009589729.11e-120(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1770934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-22NAC family protein