PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009590143.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 104aa    MW: 11872.5 Da    PI: 10.4639
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009590143.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-191567256
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +g+++AeIrd  +++    rf+lg+f tae+Aa+a+++a+ +++g+
  XP_009590143.1 15 KYRGVRKRP-WGKFAAEIRDtSRQG--GVRFWLGTFTTAEDAARACDKAAYSMRGN 67
                    8********.**********44334..4*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.7E-281576IPR001471AP2/ERF domain
PfamPF008479.0E-141566IPR001471AP2/ERF domain
PROSITE profilePS5103221.6011574IPR001471AP2/ERF domain
SMARTSM003806.0E-281580IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-191575IPR016177DNA-binding domain
CDDcd000182.80E-241575No hitNo description
PRINTSPR003671.1E-101627IPR001471AP2/ERF domain
PRINTSPR003671.1E-104056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
MDERGKIKDI TEEVKYRGVR KRPWGKFAAE IRDTSRQGGV RFWLGTFTTA EDAARACDKA  60
AYSMRGNLAI LNFPEKYNLP CSSSHFNKFV NGFVFNAREK RASS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-2911791077Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019237118.11e-54PREDICTED: ethylene-responsive transcription factor ERF096-like
SwissprotQ9LSX05e-29ERF96_ARATH; Ethylene-responsive transcription factor ERF096
TrEMBLA0A1J6KLK93e-53A0A1J6KLK9_NICAT; Ethylene-responsive transcription factor 14
STRINGXP_009590143.12e-72(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.18e-24ERF family protein
Publications ? help Back to Top
  1. Zander M,Thurow C,Gatz C
    TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression.
    Plant Physiol., 2014. 165(4): p. 1671-1683
    [PMID:24989234]