PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009590494.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 253aa    MW: 29566.4 Da    PI: 5.4577
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009590494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM768.8e-24121403128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     +G+rFhPt+ el+ ++Lk+ ++g++l+ e + ++ +diy    Pw++  + ++ eek  +fF++ +k++++ +r +r+ ++g+Wk + +  ++++
  XP_009590494.1  12 MGVRFHPTEAELI-NFLKRFLKGEPLPSECHnFQLADIYGDqPPWEIFGASDHpEEKVRFFFTRLKKQKSEHTRVRRTCANGTWKGQTSIDPIKN 105
                     7************.9**********77755559999***87368***743333255566************************************ PP

             NAM  95 kkgelvglkktLvfykgrapkge.ktdWvmheyrl 128
                      kg++vg ++ + f + r+++ge +  W+m+ey++
  XP_009590494.1 106 GKGTVVGFRRCFKFQTSRSKEGEyNKIWLMKEYSV 140
                     ***************999999984567******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-278162IPR003441NAC domain
PROSITE profilePS5100527.10410163IPR003441NAC domain
PfamPF023654.9E-1512140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MSTLPVRRGC IMGVRFHPTE AELINFLKRF LKGEPLPSEC HNFQLADIYG DQPPWEIFGA  60
SDHPEEKVRF FFTRLKKQKS EHTRVRRTCA NGTWKGQTSI DPIKNGKGTV VGFRRCFKFQ  120
TSRSKEGEYN KIWLMKEYSV RDDFFRENSI PKEDIVVCRI KKNIRAEKNY GVTMEEQDVA  180
KIIEAMLHEP DEDYCTTVQP APICQAENQV MDETQKMNEH NNSSYINDCS NYQEEIYWAD  240
DVLLDIDDFG DII
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532600.0EU753260.1 Nicotiana tabacum NAC transcription factor (NAC3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009590494.10.0PREDICTED: protein SOMBRERO-like
TrEMBLA0A1S4CNS01e-174A0A1S4CNS0_TOBAC; protein SOMBRERO-like
STRINGXP_009590494.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-17NAC domain containing protein 2