PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009591054.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 221aa    MW: 23555.4 Da    PI: 10.1403
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009591054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-193079255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrdp   g+++r++lg+f+ta eAaka++ a++ l+g
  XP_009591054.1 30 HYRGVRKRP-WGRYAAEIRDP---GQKTRVWLGTFDTAVEAAKAYDTAARLLRG 79
                    6********.**********8...557***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-303087IPR001471AP2/ERF domain
PfamPF008474.0E-123079IPR001471AP2/ERF domain
PROSITE profilePS5103222.553087IPR001471AP2/ERF domain
SuperFamilySSF541715.04E-213087IPR016177DNA-binding domain
SMARTSM003801.5E-373093IPR001471AP2/ERF domain
CDDcd000185.42E-303086No hitNo description
PRINTSPR003671.4E-103142IPR001471AP2/ERF domain
PRINTSPR003671.4E-105369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MAENGHLAGT VAVPVPTANG GVGVPSDEVH YRGVRKRPWG RYAAEIRDPG QKTRVWLGTF  60
DTAVEAAKAY DTAARLLRGR RAITNFSPTT EDNLMNTRDF MAKLSTRNHV NINTNNHGPF  120
QNSDIGSSSG GGGAVRIPLP IQNPQSRHFP VAGCSAPLQL ARDRCYVEAL TRAGVIINRD  180
PSSQTKTVDF IGGGVNGGSE PPTTSTRALN LELTLAPPGN M
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-211986371Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6690840.0AB669084.1 Nicotiana tabacum NtERF#208 gene for ethylene response factor #208, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591054.11e-162PREDICTED: ethylene-responsive transcription factor 8-like
TrEMBLR4WAH81e-160R4WAH8_TOBAC; Ethylene response factor #208
STRINGXP_009591054.11e-162(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1535068
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.13e-31erf domain protein 9