PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009592362.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 300aa    MW: 33797.1 Da    PI: 8.1525
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009592362.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.5e-1667111250
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaar 50 
                      y+GVr  + +g+Wv+eIr+p++   + r++lg+f tae Aa+a++ a+
  XP_009592362.1  67 IYHGVRKQS-WGKWVSEIREPRK---KSRIWLGTFATAELAARAHDVAA 111
                     69****776.**********843...6*******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-1066111IPR001471AP2/ERF domain
CDDcd000184.26E-2466112No hitNo description
SuperFamilySSF541712.88E-1567113IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.4E-2367114IPR001471AP2/ERF domain
SMARTSM003802.8E-2167140IPR001471AP2/ERF domain
PROSITE profilePS5103218.63767125IPR001471AP2/ERF domain
PRINTSPR003674.3E-96879IPR001471AP2/ERF domain
PRINTSPR003674.3E-990106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MEEKSLIFNN INNETTSSTI PHFSPCSSLS KRPPTLASSK QETNYKKTKC NDMNKKTKKI  60
DDLKHPIYHG VRKQSWGKWV SEIREPRKKS RIWLGTFATA ELAARAHDVA AIGISMMMRP  120
GQDWPKVADA NSLPHLRNHR CEVEVAEAKG AGMGSGRRHE HFSAPARPQE RNFSTASKCA  180
KDIQAAATKA AALNICSTNC ITEESQGELM EQFSSEEIES RESSSTSSLS CKNEDPFLDL  240
PDLLLDISQK FDKFCYYNSP WELAELKATI LITVNFGQKI FICRTTTMEL XWDYNYGTVL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754474e-39HG975447.1 Solanum pennellii chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016432455.11e-107PREDICTED: ethylene-responsive transcription factor ERF038-like
TrEMBLA0A1S3WXP51e-105A0A1S3WXP5_TOBAC; ethylene-responsive transcription factor ERF038-like
STRINGXP_009592362.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-27ERF family protein