PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009593083.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 234aa    MW: 25968.9 Da    PI: 5.0413
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009593083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.11.4e-154697156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    + y+GVr +  + +Wv+e+r+ps+   +kr++lg++ t e+Aa+a++  +++l+g+
  XP_009593083.1 46 PVYRGVRKRN-NDKWVCELREPST---QKRIWLGSYPTVEMAARAHDVVALALKGH 97
                    68*****888.8*********965...4************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.2E-114697IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.0E-2647106IPR001471AP2/ERF domain
PROSITE profilePS5103220.00747104IPR001471AP2/ERF domain
SMARTSM003801.1E-2147110IPR001471AP2/ERF domain
SuperFamilySSF541711.57E-1847106IPR016177DNA-binding domain
CDDcd000189.29E-2548106No hitNo description
PRINTSPR003672.1E-64859IPR001471AP2/ERF domain
PRINTSPR003672.1E-67086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MMNNYSSSSC SSVIRAETSD EEVILLASSK PKKRAGRKKF KETRHPVYRG VRKRNNDKWV  60
CELREPSTQK RIWLGSYPTV EMAARAHDVV ALALKGHLAT LNFADSAWRL QVPVSKDPKD  120
LRQAAAKAAE AFRPGEETDV NSRGESNTGN GDEEMKAVTE ENAANNSMQN VVTAENVMYS  180
NSCGEVGMFG TQEWQTNMEE GSLFSPNPCL LGGCFSWDDD VESDVEVSLW SYSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009593083.11e-175PREDICTED: dehydration-responsive element-binding protein 1E-like
RefseqXP_016470184.11e-175PREDICTED: dehydration-responsive element-binding protein 1E-like
TrEMBLA0A1S4A0Q41e-174A0A1S4A0Q4_TOBAC; dehydration-responsive element-binding protein 1E-like
STRINGXP_009593083.11e-175(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.17e-43ERF family protein