PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009593584.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 197aa    MW: 22301.1 Da    PI: 4.7647
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009593584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.55.8e-111539125
             NAM  1 lppGfrFhPtdeelvveyLkkkveg 25
                    lppGfrFhPtdeelvv+yL+kkv++
  XP_009593584.1 15 LPPGFRFHPTDEELVVHYLEKKVRQ 39
                    79********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-10939IPR003441NAC domain
PfamPF023655.1E-81644IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MESTGLMSGS NHLQLPPGFR FHPTDEELVV HYLEKKVRQI LGSKNGIFLV REIESIRTGR  60
GLIGRQLQVI GRLLEQTSQY LQAMLDDWVL CRIYKKNSSS TIMEMDKEDS IEDTTGSTSI  120
LPASSMNYFD QNPSIGALRV GSNFDEFLEN DMKIAKNEYE NGDDTPLMEG NSSSFLTMLN  180
QISPRSSQLN SWFSGYR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009593583.15e-83PREDICTED: NAC transcription factor 56
TrEMBLA0A1S3ZDG85e-79A0A1S3ZDG8_TOBAC; NAC transcription factor 56-like
STRINGXP_009593583.12e-82(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-11NAC domain containing protein 25