PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009594548.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 221aa    MW: 24582.2 Da    PI: 4.6946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009594548.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.19.1e-13347855
             AP2  8 wdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  XP_009594548.1  3 RHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 47
                    67889******99966...3.6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.514155IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-15357IPR016177DNA-binding domain
PfamPF008471.1E-8347IPR001471AP2/ERF domain
SMARTSM003803.6E-20361IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.2E-15356IPR001471AP2/ERF domain
CDDcd000181.04E-21357No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MNRHHHNGRW EARIGRVFGN KYLYLGTYAT QEEAATAYDM AAIEYRGLNA VTNFDLSRYI  60
KWLKPNNNNT IDQPNSNVET NIMSTPNHTI GSTLTSTTTS VSASASASTA LPYPHFQLTS  120
NTTMPDASVS QTRPPSATSA LGLLLQSTKF KEMMEMTLAA ECPPEPVEFS DPPASNFPAD  180
IKTYFDTQEF GNFGHDQGED MNIFNEINSF MQPLLQFDFN A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009594548.11e-166PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLA0A1U7Y4121e-134A0A1U7Y412_NICSY; AP2-like ethylene-responsive transcription factor At1g16060
STRINGXP_009594548.11e-165(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18152464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.22e-26ARIA-interacting double AP2 domain protein