PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009595757.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 189aa    MW: 21486.9 Da    PI: 10.5484
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009595757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like69.36.3e-2255103554
         G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                     +Wt eLH++F+eav+qL G+ +  Pk+ilelm+v+gLt+ +v+SHLQk R
  XP_009595757.1  55 EWTLELHAKFLEAVAQL-GEGRCYPKEILELMDVPGLTRMQVASHLQKCR 103
                     7****************.9*****************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.52545107IPR017930Myb domain
SuperFamilySSF466898.96E-1650103IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.0E-2151104IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-1854104IPR006447Myb domain, plants
PfamPF002494.1E-755102IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MGNDEEQNNN HEVVNSESNG KYKLRKKRGR KSTKEVNQGD SHSSGKSVKR KVCTEWTLEL  60
HAKFLEAVAQ LGEGRCYPKE ILELMDVPGL TRMQVASHLQ KCRNDNWRAP EKRKSSRNSS  120
GQGSSSGSQQ RSGHRKFGSM PRIQTNIVTN LQQQQLDQEI NQRSPPEFQL NSSNIIARRQ  180
SSTQQEQPI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009595754.21e-132PREDICTED: two-component response regulator ORR21-like
TrEMBLA0A1S3Z9M61e-128A0A1S3Z9M6_TOBAC; two-component response regulator ORR21-like
STRINGXP_009595757.11e-137(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-16response regulator 2