PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009598746.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 307aa MW: 33992.3 Da PI: 8.0176

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009598746.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.1	2.9e-16	253	295	5	47
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk XP_009598746.1 253 RRQKRMIKNRESAARSRARKQAYTHELENKVSWLEEENERLKR 295 79**************************************995 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.5E-12	249	307	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.369	251	296	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.00E-22	253	298	No hit	No description
Pfam	PF00170	5.1E-14	253	295	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.8E-15	253	298	No hit	No description
SuperFamily	SSF57959	4.75E-12	253	297	No hit	No description
PROSITE pattern	PS00036	0	256	271	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence Send to blast
MLTHGMGSQG GVGGGKEAKP NGLARQGSLY SLTLDEVQNQ LGNLGKPLNS MNLDELLKTV 60 WTIEASQDLG GNDYGAVQHG SISLHRQSSS ITMSGDLSKK TVDEVWQDIQ QGQKRDSSFD 120 KRSQERQLTF GEITLEDFLV KAGIIAESTQ GTRISGLLIG VDSMSLTQQA QWPHYQIPAM 180 HQAPAQQQQN ILPVFMPGHP VQQPLPVVAN PIVDPETQVT MSPAHLMGTL SDTQTSGRKR 240 VAPEDVIEKS VERRQKRMIK NRESAARSRA RKQAYTHELE NKVSWLEEEN ERLKRQKVGF 300 ANQIIHA

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975449	0.0	HG975449.1 Solanum pennellii chromosome ch10, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009598746.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
Swissprot	Q9LES3	1e-80	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A1S4CUS2	0.0	A0A1S4CUS2_TOBAC; ABSCISIC ACID-INSENSITIVE 5-like protein 2
STRING	XP_009598744.1	0.0	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-80	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]