PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009602832.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family EIL
Protein Properties Length: 663aa    MW: 74537.8 Da    PI: 6.2775
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009602832.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3433.52e-132384041350
                     XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWW 95 
                     eel++rmwkd+++lkrlker+k    +++ a++++k++++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWW
  XP_009602832.1  38 EELERRMWKDRVKLKRLKERQKLA--AQQ-AADKQKNKQTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWW 129
                     8*******************9963..355.59*************************************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT- CS
            EIN3  96 kekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdq 190
                     kekv+fd+ngpaai+ky+a++ + +++ ++  ++ + ++ l++lqD+tlgSLLs+lmqhcdppqr+fplekgv+pPWWPtG+e+ww+++gl+k q
  XP_009602832.1 130 KEKVKFDKNGPAAIAKYEAECRAKGEGVGN--QNGNPQSVLQDLQDATLGSLLSSLMQHCDPPQRKFPLEKGVSPPWWPTGNEEWWAKMGLPKGQ 222
                     **********************99988888..57999999******************************************************* PP

                     -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.......XXXXXXXXXXX CS
            EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.......slrkqspkvtl 276
                     + ppykkphdlkk++kv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes ++l+vl++ee+ +++ s++  ss        +r +++k+ +
  XP_009602832.1 223 K-PPYKKPHDLKKMFKVGVLTAVIKHMSPDIAKIRRLVRQSKCLQDKMTAKESSIWLAVLSREESTIQQPSSDngSSsiseapnRTRGEKKKLSV 316
                     *.9*********************************************************************976335777876667799***** PP

                     XXXXXXXXXXXXXXX.XXXXXXXXXX.................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXX CS
            EIN3 277 sceqkedvegkkeskikhvqavktta.................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsis 350
                     ++++++dv+g ++ + + ++ +++ +                 +++   +r+ k  ++++ s+ + +++  ++q ++ e +++++d n+ +
  XP_009602832.1 317 DSDSDYDVDGVNDGNGSVSSRDERGNepsdarplnavpkshqgKEKGDGQRR-K--RKRARSNPQQTQLSLNNQQPDDEARNTLPDINNSN 404
                     *********8888777766666666688899999999988876333333333.2..22222222335789999999999999999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.5E-12538285No hitNo description
Gene3DG3DSA:1.10.3180.102.9E-70162293IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.7E-60166288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 663 aa     Download sequence    Send to blast
MAVMDEIGVD ISSDIEVDDI RCDNIEEKDV SDEEIDPEEL ERRMWKDRVK LKRLKERQKL  60
AAQQAADKQK NKQTTDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
ASDNIRAWWK EKVKFDKNGP AAIAKYEAEC RAKGEGVGNQ NGNPQSVLQD LQDATLGSLL  180
SSLMQHCDPP QRKFPLEKGV SPPWWPTGNE EWWAKMGLPK GQKPPYKKPH DLKKMFKVGV  240
LTAVIKHMSP DIAKIRRLVR QSKCLQDKMT AKESSIWLAV LSREESTIQQ PSSDNGSSSI  300
SEAPNRTRGE KKKLSVDSDS DYDVDGVNDG NGSVSSRDER GNEPSDARPL NAVPKSHQGK  360
EKGDGQRRKR KRARSNPQQT QLSLNNQQPD DEARNTLPDI NNSNMQFAGH ITNESQPEKD  420
QPELQLRDSN LSVVPSTNAV STEDAFIGNG PSIYPVLENS EVVPYESRFH LGTQDSVVQH  480
QLHDTQLQSR PQFSGVNNEP RSSIFHYVPP NNGLHNGPEN SVLHELQDPG FAHGSQYPNL  540
HQPHIYQYFT PSAEFVSAHD EQQSHLAFNE PQIKTKDSGV RSSVLHGNRN DVAREDRHYG  600
KDTFETDHDR PVEMHFASPI TSGSPDYARL SSPFNFDLDV PGTLDTGDFE LFLDEDVMTF  660
FAS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A8e-731652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1366371RRKRKR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754400.0HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009602832.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X2
SwissprotO231161e-180EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A1S4APK40.0A0A1S4APK4_TOBAC; ETHYLENE INSENSITIVE 3-like 3 protein isoform X2
STRINGXP_009602831.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-160ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]