PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009602879.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 334aa    MW: 38556.9 Da    PI: 4.5429
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009602879.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM713.1e-22131443128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     +G rFhPt  e++ +yL   v++++l++++  ++ +d+y   ePw++ +      +++++  yf ++++k+++t kr +r++ +g+Wk + k ++
  XP_009602879.1  13 MGHRFHPTGREVL-KYLVGFVRDEPLPFQNElMQVADLYADkEPWQIFEaydrGNNNNNNTRYFITPQKKEKPTWKRVSRTVGKGTWKLQNKGRD 106
                     79*********99.9**********99987746666*997559****642442222344466********************************* PP

             NAM  92 vlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     v++ kg+l+g  k+L +   +++++ ++ +W+m ey+l
  XP_009602879.1 107 VFDDKGRLMGYVKSLKYIpANKSSNNVNGEWLMTEYSL 144
                     ******************656888889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-2610167IPR003441NAC domain
PROSITE profilePS5100526.0611167IPR003441NAC domain
PfamPF023656.4E-1113144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MEYSQAKCFS RSMGHRFHPT GREVLKYLVG FVRDEPLPFQ NELMQVADLY ADKEPWQIFE  60
AYDRGNNNNN NTRYFITPQK KEKPTWKRVS RTVGKGTWKL QNKGRDVFDD KGRLMGYVKS  120
LKYIPANKSS NNVNGEWLMT EYSLFDRYLV ARETKNKGFV ICKIKKKGKP GDKKNGNNIE  180
EVVNDEKMRE IEEFIKSVLQ EDVQVEDNGI RSSGTIAKDD QENNIIQYVE GDQVRDHVLG  240
LLGSPEDIVN GVDDENVQYC VDQGDEGQVH LLEEYIDSVM QSEDVQTEDN GIIMSNDIIA  300
KDDQENMEYQ VEDHQHATLW ASPEDVDLDT INFC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009602879.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A1S4CTL30.0A0A1S4CTL3_TOBAC; NAC domain-containing protein 41-like
STRINGXP_009602879.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.17e-12NAC-domain protein 101