PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009605650.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 109aa    MW: 12667.4 Da    PI: 10.0351
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009605650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.67e-2151075108
             NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                      +F+P+d +l+++ L k v+gk l++ee i  +d+y+ ePw+L   +++ +k  yf ++ +kk++t+ r nr+t +g+W ++ k k++l++ ++ 
  XP_009605650.1   5 AKFRPSDTDLIMQ-LLKFVAGKCLPTEELIVFADVYSKEPWQLIGDMNS-KKTHYFLTQLKKKKPTDARFNRTTGNGTWTQQNKGKQILDEdDSL 97 
                     69*********77.667899999999999**************866654.577899999*******************************85566 PP

             NAM  99 lvglkktLvf 108
                      +g k++L++
  XP_009605650.1  98 IIGYKRSLTY 107
                     69******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.3431109IPR003441NAC domain
PfamPF023654.7E-85108IPR003441NAC domain
SuperFamilySSF1019411.05E-196107IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    Send to blast
MEKNAKFRPS DTDLIMQLLK FVAGKCLPTE ELIVFADVYS KEPWQLIGDM NSKKTHYFLT  60
QLKKKKPTDA RFNRTTGNGT WTQQNKGKQI LDEDDSLIIG YKRSLTYKX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532641e-170EU753264.1 Nicotiana tabacum NAC transcription factor (NAC7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009605650.16e-76PREDICTED: NAC transcription factor 56-like, partial
TrEMBLA0A1S3XXK21e-70A0A1S3XXK2_TOBAC; NAC domain-containing protein 30-like
TrEMBLB3VK752e-71B3VK75_TOBAC; NAC transcription factor
STRINGXP_009605650.12e-75(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9815725
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-13NAC domain containing protein 83