PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009609331.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WRKY
Protein Properties Length: 126aa    MW: 14238.6 Da    PI: 4.9407
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009609331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.48.8e-11105126122
                     ---SS-EEEEEEE--TT-SS-E CS
            WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                     ldDgy+WrKYG+K+vk+s++pr
  XP_009609331.1 105 LDDGYKWRKYGKKMVKDSPNPR 126
                     59*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-1191126IPR003657WRKY domain
SuperFamilySSF1182906.93E-998126IPR003657WRKY domain
PROSITE profilePS5081113.724100126IPR003657WRKY domain
PfamPF031064.7E-6106126IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MAANNPSANM SDGSFRSLDS PDSDFSNQLI NFELSDIFEL DNWPVHDDPT FVVSGPSQYS  60
GNEVVVTERS RSYHEGSSNN IGSSRERKEV KDKVAFKTLS QIEILDDGYK WRKYGKKMVK  120
DSPNPR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ8712810.0AJ871281.1 Nicotiana tabacum mRNA for putative WRKY transcription factor 11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009594857.12e-88PREDICTED: probable WRKY transcription factor 50
RefseqXP_009609331.18e-89PREDICTED: probable WRKY transcription factor 50
RefseqXP_009617031.18e-89PREDICTED: probable WRKY transcription factor 50
RefseqXP_016446996.12e-88PREDICTED: probable WRKY transcription factor 50
RefseqXP_016456538.12e-88PREDICTED: probable WRKY transcription factor 50
TrEMBLA0A1S3Y4C34e-87A0A1S3Y4C3_TOBAC; probable WRKY transcription factor 50
TrEMBLQ5ND894e-87Q5ND89_TOBAC; Putative WRKY transcription factor 11
STRINGXP_009594857.16e-88(Nicotiana tomentosiformis)
STRINGXP_009609331.13e-88(Nicotiana tomentosiformis)
STRINGXP_009617031.13e-88(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21242462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.12e-15WRKY DNA-binding protein 50