PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009609992.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

BES1

Protein Properties

Length: 110aa MW: 12946.8 Da PI: 10.7127

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009609992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	122.9	4.4e-38	35	104	4	73
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgs 73 r p+ +Er +nk+RE +RRa+a ki+aGLRa+Gnyklpk+aD n+ lkALc eAGw ve+DGt yrk + XP_009609992.1 35 FRYPSDRERQKNKQREQKRRAMAHKIFAGLRAHGNYKLPKHADTNDLLKALCDEAGWHVEEDGTIYRKEK 104 5899***************************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	1.4E-34	36	103	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence Send to blast
MVEERRSVLR GCIKTSRGPW LVHKTTKNGN VVTRFRYPSD RERQKNKQRE QKRRAMAHKI 60 FAGLRAHGNY KLPKHADTND LLKALCDEAG WHVEEDGTIY RKEKVNTLFE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	5e-17	55	102	391	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	5e-17	55	102	391	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	5e-17	55	102	391	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	5e-17	55	102	391	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009795965.1	7e-71	PREDICTED: uncharacterized protein LOC104242587
TrEMBL	A0A1U7YAZ7	2e-69	A0A1U7YAZ7_NICSY; uncharacterized protein LOC104242587
STRING	XP_009609992.1	8e-78	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6204	21	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.6	1e-20	BES1 family protein