PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009610417.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 225aa    MW: 25628.7 Da    PI: 10.3886
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009610417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM89.36.7e-28201581128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sgyWkatgkdk 90 
                     lp GfrF+Ptdeel+ +yL +k+ + +l++  +i+e+ di+++ P+dLp  +   +++ yfFsk++   ++ k  +r ++    sgyWka g+ +
  XP_009610417.1  20 LPIGFRFRPTDEELLAHYLSRKIFSMPLPA-LIIPEIlDIFDSFPSDLPGDL---REKRYFFSKANGDINS-KGCSRLISgkdcSGYWKAVGQGQ 109
                     699**************************9.5688888***********543...4578****99987754.4444532224569********** PP

             NAM  91 evlsk.........kgel....vglkktLvfykgrapkgektdWvmheyrl 128
                      +++          +  +     g+kk L fy+++++    t+W+mh+y+l
  XP_009610417.1 110 LIVVPisgsaisdqQ--QqrllLGMKKALRFYQATRSGYLTTRWIMHQYSL 158
                     **9998888887541..14667**********99999999*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-3415184IPR003441NAC domain
PROSITE profilePS5100534.61220184IPR003441NAC domain
PfamPF023652.2E-1921158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MEEQKDGAKR GGGTVRSLNL PIGFRFRPTD EELLAHYLSR KIFSMPLPAL IIPEILDIFD  60
SFPSDLPGDL REKRYFFSKA NGDINSKGCS RLISGKDCSG YWKAVGQGQL IVVPISGSAI  120
SDQQQQRLLL GMKKALRFYQ ATRSGYLTTR WIMHQYSLVT ISPSDQNVNM MQVGDWSIFR  180
IYQKKLLISK NVRTKSNGFA EQCKIKTNTR KRPFNEVLKD KEVLI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-2071852169Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009610417.11e-167PREDICTED: NAC domain-containing protein 83-like isoform X2
TrEMBLA0A1S4AAV31e-164A0A1S4AAV3_TOBAC; NAC domain-containing protein 83-like isoform X2
STRINGXP_009610416.11e-165(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.17e-32NAC domain containing protein 41