PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009610833.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BES1
Protein Properties Length: 323aa    MW: 34960.4 Da    PI: 9.302
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009610833.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822217.14.2e-67121571150
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     g+sgr ptwkErEnnkrRERrRRaiaaki++GLRaqGn+klpk++DnneVlkALc eAGwvvedDGttyrkg +p+ ++e + +s ++s +ss+q
  XP_009610833.1  12 GSSGRLPTWKERENNKRRERRRRAIAAKIFTGLRAQGNFKLPKHCDNNEVLKALCLEAGWVVEDDGTTYRKGNRPP-QMENGCASMNISACSSIQ 105
                     689*************************************************************************.****************** PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsssl 150
                      s+ ss+ +spv+sy+asp+sssfpsps+ d ++    + +lp+l++l++++ssl
  XP_009610833.1 106 PSPMSSSYPSPVPSYHASPTSSSFPSPSRCDRNPP---SYILPFLHNLASIPSSL 157
                     ********************************987...59*******99999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.8E-6213137IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MTAAGDRMTS AGSSGRLPTW KERENNKRRE RRRRAIAAKI FTGLRAQGNF KLPKHCDNNE  60
VLKALCLEAG WVVEDDGTTY RKGNRPPQME NGCASMNISA CSSIQPSPMS SSYPSPVPSY  120
HASPTSSSFP SPSRCDRNPP SYILPFLHNL ASIPSSLPPL RISNSAPVTP PLSSPTRGSK  180
PKPVWESLSS VPLHSFHHPL FAASAPSSPT RRQYSKPATI PECDESDVAS VESARWVSFQ  240
TVAPSAAPTS PTFNLVKPVP QQNILLDALS GRGAFGWAEA AQKGHGSEFN FESCKVMAWE  300
GERIHEVAVD DLELTLGSGK PRA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-241686372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-241686372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-241686372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-241686372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC6332980.0KC633298.1 Petunia x hybrida BES-like transcription factor BEH2 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009610833.10.0PREDICTED: BES1/BZR1 homolog protein 2-like
RefseqXP_016453047.10.0PREDICTED: BES1/BZR1 homolog protein 2-like
SwissprotQ94A431e-102BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A1S3YM100.0A0A1S3YM10_TOBAC; BES1/BZR1 homolog protein 2-like
STRINGXP_009610833.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94862128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.63e-71BES1 family protein