PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009611780.1
Organism
Nicotiana tomentosiformis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 134aa    MW: 15642.9 Da    PI: 9.5684
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009611780.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.11.2e-2161266126
             NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykv..ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                     +F+P+d +l+++ L k v+gk l++e  i  +d+y+   ePw+L   ++ + k  yf ++ +kk++t+ r nr+t +g+W ++ k k++l++ ++
  XP_009611780.1   6 QFRPSDTDLITQ-LLKFVAGKCLPTEGLIGFADVYSNdnEPWRLIGDIS-SMKTHYFLTQLKKKKPTDARFNRTTGNGTWTQQNKGKKILDEdES 98 
                     7*********77.667889999888788888887765449****86664.467889999********************************8455 PP

             NAM  98 elvglkktLvfykgrapkgektdWvmhey 126
                       +g k++L +   ++ ++ +  W+m ey
  XP_009611780.1  99 LIIGYKRSLSYK-HKKDSSLNGYWMMTEY 126
                     569*******98.5666669********* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.5241134IPR003441NAC domain
PfamPF023653.1E-126126IPR003441NAC domain
SuperFamilySSF1019411.31E-186129IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MEKNPQFRPS DTDLITQLLK FVAGKCLPTE GLIGFADVYS NDNEPWRLIG DISSMKTHYF  60
LTQLKKKKPT DARFNRTTGN GTWTQQNKGK KILDEDESLI IGYKRSLSYK HKKDSSLNGY  120
WMMTEYFCWD FKLV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7532631e-145EU753263.1 Nicotiana tabacum NAC transcription factor (NAC6) mRNA, complete cds.
GenBankEU7532651e-145EU753265.1 Nicotiana tabacum NAC transcription factor (NAC8) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016457978.11e-90PREDICTED: uncharacterized protein LOC107781745
TrEMBLA0A1S3Z0Q63e-89A0A1S3Z0Q6_TOBAC; uncharacterized protein LOC107781745
STRINGXP_009611780.12e-96(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9815725
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.16e-13NAC family protein