PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_009613714.1

Organism

Nicotiana tomentosiformis

Taxonomic ID

4098

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 507aa MW: 56446.3 Da PI: 6.738

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_009613714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.2	2.4e-10	203	243	4	41
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k rr+++NReAAr+sR+RKka++++Le+ + ++Le+e XP_009613714.1 203 AKTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLEQE 243 6889************************9733355555555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.3E-6	200	277	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.3E-8	201	248	No hit	No description
PROSITE profile	PS50217	9.163	202	246	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.9E-7	203	243	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.9E-6	204	246	No hit	No description
CDD	cd14708	5.84E-21	204	254	No hit	No description
PROSITE pattern	PS00036	0	207	222	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	4.8E-31	285	360	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence Send to blast
MESQRIGESG SLSAESGPSH HHHNMSYALF RGLNPPNTSF MYHSTPNNQE PPAFDFGELE 60 EAIVLQGVKM SNDEAAKASL YAATNRPAAT LEMFPSWPTR FHHTPRGSSK SGEESSDSGS 120 ALNTFSSRGE PHLEPESPVS GKPSSDYQSL EQNQQQIQIP QQQLQEMASD SPRTIVSHIE 180 PASKPNYEKR KGAGSTSDRV VDAKTLRRLA QNREAARKSR LRKKAYVQQL ETSRIRLAQL 240 EQELQRARSQ GLFMGGGAAA GANISSGAAI FDMEYSRWLD DDQRHISELR TALQAHLGDG 300 DLRIIVDGYI AHYDEIFLLK GVAAKSDVFH LITGMWTTPA ERCFLWMGGF RPSELIKMLI 360 TQLDPLTQQQ VVGIYSLQQS SQQAEEALSQ GLEQLQQSLI ETVATGSLND GMHHMAVALG 420 KLANLEGFVR QADNLRQQTL HQLHRILTVR QAARCFLVIG EYYGRLRALS SLWASRPRET 480 MMVDDNSCQT TTELQMIQAS QHHFSNM

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence Send to blast

MESQRIGESG SLSAESGPSH HHHNMSYALF RGLNPPNTSF MYHSTPNNQE PPAFDFGELE  60
EAIVLQGVKM SNDEAAKASL YAATNRPAAT LEMFPSWPTR FHHTPRGSSK SGEESSDSGS  120
ALNTFSSRGE PHLEPESPVS GKPSSDYQSL EQNQQQIQIP QQQLQEMASD SPRTIVSHIE  180
PASKPNYEKR KGAGSTSDRV VDAKTLRRLA QNREAARKSR LRKKAYVQQL ETSRIRLAQL  240
EQELQRARSQ GLFMGGGAAA GANISSGAAI FDMEYSRWLD DDQRHISELR TALQAHLGDG  300
DLRIIVDGYI AHYDEIFLLK GVAAKSDVFH LITGMWTTPA ERCFLWMGGF RPSELIKMLI  360
TQLDPLTQQQ VVGIYSLQQS SQQAEEALSQ GLEQLQQSLI ETVATGSLND GMHHMAVALG  420
KLANLEGFVR QADNLRQQTL HQLHRILTVR QAARCFLVIG EYYGRLRALS SLWASRPRET  480
MMVDDNSCQT TTELQMIQAS QHHFSNM

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009613714.1	0.0	PREDICTED: transcription factor TGA2.2-like isoform X2
Swissprot	Q93XM6	0.0	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A1J6IMX9	0.0	A0A1J6IMX9_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
STRING	XP_009613713.1	0.0	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-179	bZIP family protein

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]